Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes

Category

Published in:

Frontiers in Microbiology
Vol. 15, articlenr.:1336532

Volume:

15

Date Issued:

2024

DOI:

10.3389/fmicb.2024.1336532

Language:

English

Type of Resource:

Text

Extent:

17 Seiten

Publisher:

Frontiers Media SA

Keywords:

metagenomics; ONT; bioinformatics; pathogens; antimicrobial resistance; KMA; database; results interpretation

DDC subject of DNB:

610 Medical sciences, Medicine, Nutrition

Link to Raw Object:

https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1336532/pdf

Institution:

German Federal Institute for Risk Assessment, German Federal Institute for Risk Assessment, Department 4, 4 NSZ - Nationales Studienzentrum für Sequenzierungen in der Risikobewertung