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Omicron subvariant BA.5 efficiently infects lung cells

Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Hoffmann, Markus;
Affiliation
Departments of Microbiology and Immunology, BSB 3-712, University of Iowa, Iowa City, United States
Wong, Lok-Yin Roy;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Arora, Prerna;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Zhang, Lu;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Rocha, Cheila;
Affiliation
Departments of Microbiology and Immunology, BSB 3-712, University of Iowa, Iowa City, United States
Odle, Abby;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Nehlmeier, Inga;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Kempf, Amy;
Affiliation
Institute of Virology, Charité - Universitätsmedizin Berlin, Campus Charité Mitte, Berlin, Germany
Richter, Anja;
GND
1230441719
Affiliation
Institut für Virusdiagnostik (IVD), Friedrich-Loeffler-Institut, Greifswald - Insel Riems, Germany
Halwe, Nico Joel;
Affiliation
Institut für Virusdiagnostik (IVD), Friedrich-Loeffler-Institut, Greifswald - Insel Riems, Germany
Schön, Jacob;
GND
1221276018
Affiliation
Institut für Virusdiagnostik (IVD), Friedrich-Loeffler-Institut, Greifswald - Insel Riems, Germany
Ulrich, Lorenz;
GND
133501620
Affiliation
Institut für Virusdiagnostik (IVD), Friedrich-Loeffler-Institut, Greifswald - Insel Riems, Germany
Hoffmann, Donata;
GND
1019543523
Affiliation
Institut für Virusdiagnostik (IVD), Friedrich-Loeffler-Institut, Greifswald - Insel Riems, Germany
Beer, Martin;
Affiliation
Institute of Virology, Charité - Universitätsmedizin Berlin, Campus Charité Mitte, Berlin, Germany
Drosten, Christian;
Affiliation
Departments of Microbiology and Immunology, BSB 3-712, University of Iowa, Iowa City, United States
Perlman, Stanley;
Affiliation
Infection Biology Unit, German Primate Center – Leibniz Institute for Primate Research, Göttingen, Germany
Pöhlmann, Stefan

The SARS-CoV-2 Omicron subvariants BA.1 and BA.2 exhibit reduced lung cell infection relative to previously circulating SARS-CoV-2 variants, which may account for their reduced pathogenicity. However, it is unclear whether lung cell infection by BA.5, which displaced these variants, remains attenuated. Here, we show that the spike (S) protein of BA.5 exhibits increased cleavage at the S1/S2 site and drives cell-cell fusion and lung cell entry with higher efficiency than its counterparts from BA.1 and BA.2. Increased lung cell entry depends on mutation H69Δ/V70Δ and is associated with efficient replication of BA.5 in cultured lung cells. Further, BA.5 replicates in the lungs of female Balb/c mice and the nasal cavity of female ferrets with much higher efficiency than BA.1. These results suggest that BA.5 has acquired the ability to efficiently infect lung cells, a prerequisite for causing severe disease, suggesting that evolution of Omicron subvariants can result in partial loss of attenuation.

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