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  • The OHEJP BeONE Project – Salmonella enterica genome assembly dataset

The OHEJP BeONE Project – Salmonella enterica genome assembly dataset

Affiliation
National Institute of Health Doutor Ricardo Jorge (INSA), Portugal
Mixão, Verónica;
Affiliation
National Institute of Health Doutor Ricardo Jorge (INSA), Portugal
Pinto, Miguel;
Affiliation
National Institute of Health Doutor Ricardo Jorge (INSA), Portugal
Gomes, João Paulo;
Affiliation
National Institute of Health Doutor Ricardo Jorge (INSA), Portugal
Sobral, Daniel;
Affiliation
German Federal Institute for Risk Assessment (BfR), Germany
Brendebach, Holger;
Affiliation
German Federal Institute for Risk Assessment (BfR), Germany
Deneke, Carlus;
Affiliation
German Federal Institute for Risk Assessment (BfR), Germany
Tausch, Simon;
Affiliation
Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM), Italy
Di Pasquale, Adriano;
Affiliation
National Institute of Public Health and the Environment (RIVM), Netherlands
Swart-Coipan, Claudia;
Affiliation
National Veterinary Research Institute of Poland (PIWET), Poland
Iwan, Ewelina;
GND
1022638580
Linde, Jörg;
Affiliation
Norwegian Veterinary Institute (NVI), Norway
Lagesen, Karin;
Affiliation
Animal and Plant Health Agency (APHA), United Kingdom
Petrovska, Liljana;
Affiliation
Norwegian Institute of Public Health (NIPH), Norway
Umaer Naseer, Mohammed;
Affiliation
Technical University of Denmark (DTU), Denmark
Sommer Kaas, Rolf;
Affiliation
Robert Koch Institute (RKI), Germany
Simon, Sandra;
Affiliation
Statens Serum Institut (SSI), Denmark
Joensen, Katrine;
Affiliation
Statens Serum Institut (SSI), Denmark
Kiil, Kristoffer;
Affiliation
Statens Serum Institut (SSI), Denmark
Nielsen, Sofie;
Affiliation
National Institute of Health Doutor Ricardo Jorge (INSA), Portugal
Borges, Vítor

s dataset comprises the genome assemblies of 1,540 Salmonella enterica samples collected by the BeONE Consortium on behalf of the One Health European Joint Programme “BeONE: Building Integrative Tools for One Health Surveillance” (https://onehealthejp.eu/jrp-beone/). Additionally, a complementary dataset is also made available (https://zenodo.org/record/7119735), comprising genome assemblies of 1,434 S. enterica samples selected among the Whole-Genome Sequencing (WGS) data publicly available in the European Nucleotide Archive (ENA) or in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA).

Category

Published in:
Zenodo
Edition:
Version v1
Date Issued:
31.10.2022
DOI:
10.5281/zenodo.7267786
Language:
English
Type of Resource:
Text
Extent:
2 Dateien
Publisher:
Zenodo
Keywords:
Salmonella enterica; Genomic data; One Health; OHEJP BeONE Project
DDC subject of DNB:
570 Life science
URL:
https://zenodo.org/record/7267786
Link to Context:
https://zenodo.org/communities/ohejp/
Institution:
Friedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses

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